Up

• Nobuto Takeuchi, Otto X. Cordero, Eugene V. Koonin, and Kunihiko Kaneko
  Gene-specific selective sweeps in bacteria and archaea caused by negative frequency-dependent selection.
  BMC Biology (2015) 13 (1):20 PubMed Full-Text (open access)
• Nobuto Takeuchi, Kunihiko Kaneko, and Eugene V. Koonin
  Horizontal gene transfer can rescue prokaryotes from Muller's ratchet: Benefit of DNA from dead cells and population subdivision.
  G3: Genes, Genomes, Genetics (2014) 4(2):325-339 PubMed Full-Text (open access)
• Nobuto Takeuchi and Paulien Hogeweg
  Evolutionary dynamics of RNA-like replicator systems: A bioinformatic approach to the origin of life
  Physics of Life Reviews (2012) 9(3):279-284 PubMed Full-Text (open access)
• Nobuto Takeuchi and Paulien Hogeweg
  Reply to the commentaries on "Evolutionary dynamics of RNA-like replicator systems: A bioinformatic approach to the origin of life"
  Physics of Life Reviews (2012) 9(3):219-263 Full-Text PDF
• Nobuto Takeuchi, Paulien Hogeweg and Eugene V. Koonin
  On the origin of DNA genomes: Evolution of the division of labor between template and catalyst in model replicator systems
  PLoS Computational Biology (2011) 7(3): e1002024 PubMed Full-Text (open access) PDF
• Nobuto Takeuchi and Paulien Hogeweg
  Evolution of complexity in RNA-like replicator systems
  Biology Direct (2008) 3:11 PubMed Full-Text (open access)

• Nobuto Takeuchi
  Evolutionary Dynamics of RNA-like Replicators---A Bioinformatic Approach to the Origin of Life
  Utrecht University (2010) Full-Text Printed
  This thesis was also published as a book. Amazon

• Nobuto Takeuchi
  Spontaneous symmetry breaking in complementary replication
  Modelling Biological Evolution
  April 30, 2015
  Leicester, UK
  
• Nobuto Takeuchi
  On the roles of parasites in RNA world
  The second joint international conference, ISSOL - the International Astrobiology Society and Bioastronomy
  July 6-11, 2014
  Nara, Japan
  poster
• Nobuto Takeuchi
  Horizontal gene transfer can rescue prokaryotes from Muller's ratchet
  Society for Molecular Biology and Evolution Satellite Meeting, Reticulated Microbial Evolution
  April 29, 2014
  Kiel, Germany
  slides
• Nobuto Takeuchi
  Horizontal gene transfer can rescue prokaryotes from Muller's ratchet
  Society for General Microbiology Annual Conference
  April 16, 2014
  Liverpool, UK
  slides
• Nobuto Takeuchi
  Evolutionary dynamics of RNA-like replicator systems: roles of parasites
  Origins of Information Processing: Evolution at Multiple Levels (Symposium on the occasion of the PhD defense of Folkert K. de Boer)
  May 15, 2012
  Utrecht, The Netherlands
  slides
• Nobuto Takeuchi
  On the origin of DNA genomes: evolution of the division of labor between template and catalyst in model replicator systems
  SMBE '11 (Society for Molecular Biology and Evolution)
  July 27, 2011
  Kyoto, Japan
  abstract slides
• Nobuto Takeuchi and Paulien Hogeweg
  On the degree of freedom in multilevel evolutionary models
  ECAL '09 (European Conference on Artificial Life), a workshop on Levels of Selection
  September 14, 2009
  Budapest, Hungary
  PDF slides (w/o movies)
• Takeuchi N and Hogeweg P
  Evolution of complexity in RNA-like replicator systems
  Artificial Life XI
  August 5-8, 2008
  hosted by the University of Southampton, UK
  slides (w/o movies) abstract
  
• Takeuchi N, Salazar L, Poole AM and Hogeweg P
  The intensity of diffusion can affect the course evolution in a non-monotonic manner: the evolutionary dynamics of RNA-like replicators with strand displacement
  NVTB (Dutch Society for Theoretical Biology) annual meeting
  May 22-23, 2008
  at Doopsgezind Broederschapshuis Schoorl, the Netherlands
  slides (w/o movies) abstract
  
• Takeuchi N and Hogeweg P
  Evolution of complexity in RNA-like replicators
  ECCS'07 (European Conference on Complex Systems)
  October 1-5, 2007
  at Dresden University of Technology, Germany
  slides poster
  
• Takeuchi N and Hogeweg P
  Evolution of complexity in RNA-like replicators
  NVTB (Dutch Society for Theoretical Biology) annual meeting
  9-10 May, 2007
  at Doopsgezind Broederschapshuis Schoorl, the Netherlands
  slides (w/o movies) abstract
  
• Takeuchi N, Poorthuis PH and Hogeweg P
  Multi-level processes in models of previotic evolution
  Astrobiology & Origins of Life, Origins Institute Conference
  24-28 May, 2005
  at McMaster University, Canada
  poster abstract
• Takeuchi N, Poorthuis PH, Hogeweg P
  Phenotypic error threshold; additivity and epistasis in RNA evolution
  NVTB (Dutch Society for Theoretical Biology) annual meeting
  3-4 March, 2005
  at Doopsgezind Broederschapshuis Schoorl, the Netherlands
  slides abstract
  
• Takeuchi N. and Hogeweg P.
  Error Threshold and Compartmentalization; limited diffusibility and small population size counteract group selection
  NVTB (Dutch Society for Theoretical Biology) annual meeting
  26-27 February, 2004
  at Doopsgezind Broederschapshuis Schoorl, the Netherlands
  slides abstract
• Takeuchi N. and Hogeweg P.
  Information Threshold and Compartmentalization; limited diffusibility and small population size counteract group selection
  Annual Meeting of The Society for Mathematical Biology (SMB)
  6-9 August, 2003
  at University of Dundee, UK
  poster abstract