RNAlib-2.4.3
plot_utils.h
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1 #ifndef VIENNA_RNA_PACKAGE_PLOT_UTILS_H
2 #define VIENNA_RNA_PACKAGE_PLOT_UTILS_H
3 
20 char **
21 vrna_annotate_covar_struct(const char **alignment,
22  const char *structure,
23  vrna_md_t *md);
24 
25 
31 vrna_annotate_covar_pairs(const char **alignment,
32  vrna_ep_t *pl,
33  vrna_ep_t *mfel,
34  double threshold,
35  vrna_md_t *md);
36 
37 
42 #endif
Data structure representing a single entry of an element probability list (e.g. list of pair probabil...
Definition: structure_utils.h:115
vrna_cpair_t * vrna_annotate_covar_pairs(const char **alignment, vrna_ep_t *pl, vrna_ep_t *mfel, double threshold, vrna_md_t *md)
Produce covariance annotation for an alignment given a set of base pairs.
this datastructure is used as input parameter in functions of PS_dot.c
Definition: data_structures.h:114
The data structure that contains the complete model details used throughout the calculations.
Definition: model.h:189
char ** vrna_annotate_covar_struct(const char **alignment, const char *structure, vrna_md_t *md)
Produce covariance annotation for an alignment given a secondary structure.