RNAlib-2.4.3
ali_plex.h
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#ifndef VIENNA_RNA_PACKAGE_ALI_PLEX_H
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#define VIENNA_RNA_PACKAGE_ALI_PLEX_H
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#include <
ViennaRNA/data_structures.h
>
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duplexT
**aliLduplexfold(
const
char
*s1[],
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const
char
*s2[],
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const
int
threshold,
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const
int
extension_cost,
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const
int
alignment_length,
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const
int
delta,
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const
int
fast,
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const
int
il_a,
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const
int
il_b,
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const
int
b_a,
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const
int
b_b);
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duplexT
**aliLduplexfold_XS(
const
char
*s1[],
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const
char
*s2[],
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const
int
**access_s1,
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const
int
**access_s2,
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const
int
threshold,
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const
int
alignment_length,
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const
int
delta,
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const
int
fast,
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const
int
il_a,
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const
int
il_b,
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const
int
b_a,
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const
int
b_b);
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/*
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* extern duplexT aliduplexfold(const char *s1[], const char *s2[], const int extension_cost);
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* extern duplexT aliduplexfold_XS(const char *s1[], const char *s2[],const int **access_s1,
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* const int **access_s2, const int i_pos, const int j_pos, const int threshold);
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*/
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#endif
data_structures.h
Various data structures and pre-processor macros.
duplexT
Data structure for RNAduplex.
Definition:
data_structures.h:212
ViennaRNA
ali_plex.h
Generated on Tue Nov 14 2017 10:01:20 for RNAlib-2.4.3 by
1.8.13